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Getting started with MOFA-FLEX
Tutorials
MOFA-FLEX for MOFA users
Incorporating prior domain knowledge
Incorporating prior knowledge in a multi-omic multi-group setting
Joint analysis of spatial and single-cell RNA-seq data with prior domain knowledge
The MOFA-FLEX model
API
Core
mofaflex.DataOptions
mofaflex.ModelOptions
mofaflex.TrainingOptions
mofaflex.SmoothOptions
mofaflex.MOFAFLEX
mofaflex.FeatureSet
mofaflex.FeatureSets
mofaflex._core.settings.Settings
Tools
DataGenerator
factor_correlation
get_free_gpu_idx
match
msigdb_get_features
msigdb_list_categories
msigdb_list_versions
test_annotation_significance
Plotting
all_weights
covariates_factor_scatter
factor
factor_correlation
factor_significance
factor_sparsity_histogram
factors_covariate
factors_scatter
gp_covariate
overview
smoothness
top_weights
training_curve
variance_explained
weight_sparsity_histogram
weights
Changelog
Contributing guide
References
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