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mofaflex

  • Getting started with MOFA-FLEX
  • Tutorials
    • MOFA-FLEX for MOFA users
    • Incorporating prior domain knowledge
    • Incorporating prior knowledge in a multi-omic multi-group setting
    • Joint analysis of spatial and single-cell RNA-seq data with prior domain knowledge
  • The MOFA-FLEX model
  • API
    • Core
      • mofaflex.DataOptions
      • mofaflex.ModelOptions
      • mofaflex.TrainingOptions
      • mofaflex.SmoothOptions
      • mofaflex.MOFAFLEX
      • mofaflex.FeatureSet
      • mofaflex.FeatureSets
      • mofaflex._core.settings.Settings
    • Tools
      • DataGenerator
      • factor_correlation
      • get_free_gpu_idx
      • match
      • msigdb_get_features
      • msigdb_list_categories
      • msigdb_list_versions
      • test_annotation_significance
    • Plotting
      • all_weights
      • covariates_factor_scatter
      • factor
      • factor_correlation
      • factor_significance
      • factor_sparsity_histogram
      • factors_covariate
      • factors_scatter
      • gp_covariate
      • overview
      • smoothness
      • top_weights
      • training_curve
      • variance_explained
      • weight_sparsity_histogram
      • weights
  • Changelog
  • Contributing guide
  • References
  • .md

Tutorials

Tutorials#

  • MOFA-FLEX for MOFA users
  • Incorporating prior domain knowledge
  • Incorporating prior knowledge in a multi-omic multi-group setting
  • Joint analysis of spatial and single-cell RNA-seq data with prior domain knowledge

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Getting started with MOFA-FLEX

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MOFA-FLEX for MOFA users

By Ilia Kats , Arber Qoku , Florin Walter , Martin Rohbeck

© Copyright 2026, Ilia Kats <i.kats@dkfz.de>, Arber Qoku <arber.qoku@dkfz.de>, Florin Walter <florin.walter@dkfz.de>, Martin Rohbeck <martin.rohbeck@dkfz.de>..